PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla010712
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 215aa    MW: 23903 Da    PI: 10.0169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla010712genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-1785135255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +g++++eIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  Cla010712  85 RYRGVRRRP-WGKYASEIRDPAKNG--ARVWLGTYETAEDAAWAYDRAAFRMRG 135
                8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.33E-3184144No hitNo description
SuperFamilySSF541717.19E-2385144IPR016177DNA-binding domain
SMARTSM003801.5E-3685149IPR001471AP2/ERF domain
PfamPF008472.0E-1185135IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.3E-3185144IPR001471AP2/ERF domain
PROSITE profilePS5103224.23685143IPR001471AP2/ERF domain
PRINTSPR003671.3E-138697IPR001471AP2/ERF domain
PRINTSPR003671.3E-13125145IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MEVQKFPYSD LFSFLSDQWT HFSLKPNLSH DMMLFNSLHD AVVFGLSPLH YSIPSPDHPS  60
SAALNLHPFP TTPAAATQMD SQGKRYRGVR RRPWGKYASE IRDPAKNGAR VWLGTYETAE  120
DAAWAYDRAA FRMRGSKALL NFPNRIGSGD PPPLRVSARH REHDIDNHIL APLAHGSAKR  180
RKGAANKDAQ PESSVFQVGS SQMSVLPVGE QLLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-3681150170ATERF1
3gcc_A4e-3681150170ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007038272.11e-58AP2/ERF domain-containing transcription factor, putative
SwissprotQ404797e-60ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A061G0821e-58A0A061G082_THECC; AP2/ERF domain-containing transcription factor, putative
TrEMBLA0A0C5AHM88e-59A0A0C5AHM8_BETPL; ERF7 protein
STRINGVIT_16s0013g00890.t015e-56(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22393382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.16e-41ethylene responsive element binding factor 1